Carnation DB

Dca52333.1

Annotation

6-exons
f-1
sp|F6HTC6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g00580#GO:0008168#1F0P0C
AT4G18030.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr4:10012850-10015267 REVERSE LENGTH=621
Repeat List (scaffold689)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52333.1	1	608	609	75.04	608	75	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HTC6_VITVI	1	610	611	99.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52333.1	2	599	609	72.24	598	73	0
Target_name	Start	End	Length	Cov(%)
AT4G18030.1	6	604	621	96.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold689	Augustus	mRNA	54455	57262	.	+	.	ID=Dca52333.1;Parent=Dca52333
scaffold689	Augustus	exon	54455	55108	.	+	.	ID=Dca52333.1.exon1;Parent=Dca52333.1
scaffold689	Augustus	exon	55457	55667	.	+	.	ID=Dca52333.1.exon2;Parent=Dca52333.1
scaffold689	Augus-PASA	exon	55924	56206	.	+	.	ID=Dca52333.1.exon3;Parent=Dca52333.1
scaffold689	Augus-PASA	exon	56336	56704	.	+	.	ID=Dca52333.1.exon4;Parent=Dca52333.1
scaffold689	Augus-PASA	exon	56862	56939	.	+	.	ID=Dca52333.1.exon5;Parent=Dca52333.1
scaffold689	Augus-PASA	exon	57028	57262	.	+	.	ID=Dca52333.1.exon6;Parent=Dca52333.1