Dca52478.1
Annotation
- 2-exons
- f-1
- sp|A5B7X7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_017631#GO:0003676;GO:0015074#1F1P0C
- Os02t0671800-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold6917)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52478.1 |
1 |
413 |
417 |
42.2 |
413 |
43 |
3e-87
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5B7X7_VITVI |
1 |
370 |
1191 |
31.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52478.1 |
139 |
393 |
417 |
19.9 |
255 |
32 |
1e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0671800-01 |
267 |
525 |
573 |
45.2 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6917 |
Augustus |
mRNA |
899 |
2256 |
. |
+ |
. |
ID=Dca52478.1;Parent=Dca52478 |
| scaffold6917 |
Augustus |
exon |
899 |
2123 |
. |
+ |
. |
ID=Dca52478.1.exon1;Parent=Dca52478.1 |
| scaffold6917 |
Augustus |
exon |
2228 |
2256 |
. |
+ |
. |
ID=Dca52478.1.exon2;Parent=Dca52478.1 |
