Dca52546.1
Annotation
- 3-exons
- f-1
- sp|A5ATZ0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_013041#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Os08t0202300-03 Reverse transcriptase domain containing protein.
- Repeat List (scaffold6939)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52546.1 |
522 |
578 |
579 |
4.14 |
57 |
43 |
1e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5ATZ0_VITVI |
1296 |
1352 |
1357 |
4.2 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52546.1 |
1 |
389 |
579 |
30.56 |
389 |
46 |
4e-91
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
197 |
586 |
591 |
65.98 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold6939 |
Augustus |
mRNA |
6947 |
9120 |
. |
+ |
. |
ID=Dca52546.1;Parent=Dca52546 |
| scaffold6939 |
Augustus |
exon |
6947 |
8117 |
. |
+ |
. |
ID=Dca52546.1.exon1;Parent=Dca52546.1 |
| scaffold6939 |
Augustus |
exon |
8322 |
8701 |
. |
+ |
. |
ID=Dca52546.1.exon2;Parent=Dca52546.1 |
| scaffold6939 |
Augustus |
exon |
8932 |
9120 |
. |
+ |
. |
ID=Dca52546.1.exon3;Parent=Dca52546.1 |
