Carnation DB

Dca52558.1

Annotation

5-exons
f-1
sp|B9MU38_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_590025#GO:0003854;GO:0000166;GO:0006694#2F1P0C
Os10t0576900-01 NAD(P)-binding domain containing protein.
Repeat List (scaffold694)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52558.1	1	303	316	63.6	303	67	9e-120
Target_name	Start	End	Length	Cov(%)
sp\|B9MU38_POPTR	1	301	305	98.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52558.1	12	308	316	50.63	297	52	5e-84
Target_name	Start	End	Length	Cov(%)
Os10t0576900-01	13	319	320	95.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold694	Augus-PASA	mRNA	106094	108942	.	-	.	ID=Dca52558.1;Parent=Dca52558
scaffold694	Augus-PASA	exon	106094	106220	.	-	.	ID=Dca52558.1.exon1;Parent=Dca52558.1
scaffold694	Augus-PASA	exon	106819	107153	.	-	.	ID=Dca52558.1.exon2;Parent=Dca52558.1
scaffold694	Augus-PASA	exon	107254	107445	.	-	.	ID=Dca52558.1.exon3;Parent=Dca52558.1
scaffold694	Augus-PASA	exon	108340	108503	.	-	.	ID=Dca52558.1.exon4;Parent=Dca52558.1
scaffold694	Augus-PASA	exon	108810	108942	.	-	.	ID=Dca52558.1.exon5;Parent=Dca52558.1