Carnation DB

Dca527.1

Annotation

8-exons
f-1
sp|B9IAV9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_824372#unknown#0F0P0C
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca527.1	13	286	294	48.97	274	52	1e-62
Target_name	Start	End	Length	Cov(%)
sp\|B9IAV9_POPTR	14	286	307	88.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca527.1	14	291	294	47.95	278	44	4e-54
Target_name	Start	End	Length	Cov(%)
AT5G48240.3	17	341	356	91.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	113382	115599	.	-	.	ID=Dca527.1;Parent=Dca527
scaffold101	Augustus	exon	113382	113405	.	-	.	ID=Dca527.1.exon1;Parent=Dca527.1
scaffold101	Augustus	exon	113580	113681	.	-	.	ID=Dca527.1.exon2;Parent=Dca527.1
scaffold101	Augustus	exon	113857	113936	.	-	.	ID=Dca527.1.exon3;Parent=Dca527.1
scaffold101	Augustus	exon	114520	114580	.	-	.	ID=Dca527.1.exon4;Parent=Dca527.1
scaffold101	Augustus	exon	114658	114677	.	-	.	ID=Dca527.1.exon5;Parent=Dca527.1
scaffold101	Augustus	exon	114807	114888	.	-	.	ID=Dca527.1.exon6;Parent=Dca527.1
scaffold101	Augustus	exon	115000	115101	.	-	.	ID=Dca527.1.exon7;Parent=Dca527.1
scaffold101	Augustus	exon	115186	115599	.	-	.	ID=Dca527.1.exon8;Parent=Dca527.1