Carnation DB

Dca52705.1

Annotation

5-exons
f-1
sp|O23864_9ORYZ#Polyprotein#Oryza australiensis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
Repeat List (scaffold6984)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52705.1	39	510	516	60.07	472	57	7e-173
Target_name	Start	End	Length	Cov(%)
sp\|O23864_9ORYZ	768	1313	1317	41.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52705.1	59	501	516	30.23	443	30	1e-57
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	880	1384	1401	36.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold6984	Augustus	mRNA	5150	11644	.	-	.	ID=Dca52705.1;Parent=Dca52705
scaffold6984	Augustus	exon	5150	5681	.	-	.	ID=Dca52705.1.exon1;Parent=Dca52705.1
scaffold6984	Augustus	exon	5748	6207	.	-	.	ID=Dca52705.1.exon2;Parent=Dca52705.1
scaffold6984	Augustus	exon	6335	6777	.	-	.	ID=Dca52705.1.exon3;Parent=Dca52705.1
scaffold6984	Augustus	exon	8273	8349	.	-	.	ID=Dca52705.1.exon4;Parent=Dca52705.1
scaffold6984	Augustus	exon	11606	11644	.	-	.	ID=Dca52705.1.exon5;Parent=Dca52705.1