Carnation DB

Dca528.1

Annotation

6-exons
f-1
sp|D7SHV4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g07960#GO:0016881;GO:0005524#2F0P0C
AT1G63800.1 | Symbols: UBC5 | ubiquitin-conjugating enzyme 5 | chr1:23667888-23669003 REVERSE LENGTH=185
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca528.1	1	177	177	82.48	177	83	9e-84
Target_name	Start	End	Length	Cov(%)
sp\|D7SHV4_VITVI	10	184	184	95.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca528.1	1	177	177	71.18	177	72	1e-71
Target_name	Start	End	Length	Cov(%)
AT1G63800.1	10	185	185	95.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augus-PASA	mRNA	126208	128021	.	-	.	ID=Dca528.1;Parent=Dca528
scaffold101	Augus-PASA	exon	126208	126347	.	-	.	ID=Dca528.1.exon1;Parent=Dca528.1
scaffold101	Augus-PASA	exon	126741	126869	.	-	.	ID=Dca528.1.exon2;Parent=Dca528.1
scaffold101	Augus-PASA	exon	126947	126999	.	-	.	ID=Dca528.1.exon3;Parent=Dca528.1
scaffold101	Augus-PASA	exon	127156	127270	.	-	.	ID=Dca528.1.exon4;Parent=Dca528.1
scaffold101	Augus-PASA	exon	127449	127528	.	-	.	ID=Dca528.1.exon5;Parent=Dca528.1
scaffold101	Augustus	exon	128005	128021	.	-	.	ID=Dca528.1.exon6;Parent=Dca528.1