Carnation DB

Dca52806.1

Annotation

12-exons
f-1
sp|F6HE19_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04980#unknown#0F0P0C
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1148818-1153895 REVERSE LENGTH=1082
Repeat List (scaffold7)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52806.1	1	1122	1122	61.22	1122	60	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HE19_VITVI	1	1146	1146	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52806.1	1	1122	1122	51.15	1122	50	0
Target_name	Start	End	Length	Cov(%)
AT1G04300.3	1	1082	1082	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7	Augustus	mRNA	331617	339352	.	-	.	ID=Dca52806.1;Parent=Dca52806
scaffold7	Augustus	exon	331617	332945	.	-	.	ID=Dca52806.1.exon1;Parent=Dca52806.1
scaffold7	Augustus	exon	333239	333446	.	-	.	ID=Dca52806.1.exon2;Parent=Dca52806.1
scaffold7	Augustus	exon	333526	333995	.	-	.	ID=Dca52806.1.exon3;Parent=Dca52806.1
scaffold7	Augustus	exon	334364	334514	.	-	.	ID=Dca52806.1.exon4;Parent=Dca52806.1
scaffold7	Augustus	exon	334599	334711	.	-	.	ID=Dca52806.1.exon5;Parent=Dca52806.1
scaffold7	Augustus	exon	335425	335773	.	-	.	ID=Dca52806.1.exon6;Parent=Dca52806.1
scaffold7	Augustus	exon	336220	336378	.	-	.	ID=Dca52806.1.exon7;Parent=Dca52806.1
scaffold7	Augustus	exon	336933	337062	.	-	.	ID=Dca52806.1.exon8;Parent=Dca52806.1
scaffold7	Augustus	exon	337151	337219	.	-	.	ID=Dca52806.1.exon9;Parent=Dca52806.1
scaffold7	Augustus	exon	337333	337421	.	-	.	ID=Dca52806.1.exon10;Parent=Dca52806.1
scaffold7	Augustus	exon	337792	337903	.	-	.	ID=Dca52806.1.exon11;Parent=Dca52806.1
scaffold7	Augustus	exon	339163	339352	.	-	.	ID=Dca52806.1.exon12;Parent=Dca52806.1