Carnation DB

Dca52855.1

Annotation

10-exons
f-1
sp|A5BSQ6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0049g01160#GO:0008270#1F0P0C
AT3G23280.1 | Symbols: XBAT35 | XB3 ortholog 5 in Arabidopsis thaliana | chr3:8321588-8324109 FORWARD LENGTH=462
Repeat List (scaffold7)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52855.1	1	469	469	59.06	469	54	3e-143
Target_name	Start	End	Length	Cov(%)
sp\|A5BSQ6_VITVI	1	500	500	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52855.1	1	469	469	52.87	469	51	6e-131
Target_name	Start	End	Length	Cov(%)
AT3G23280.1	1	462	462	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7	Augus-PASA	mRNA	613982	617663	.	+	.	ID=Dca52855.1;Parent=Dca52855
scaffold7	Augus-PASA	exon	613982	614083	.	+	.	ID=Dca52855.1.exon1;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	614713	614827	.	+	.	ID=Dca52855.1.exon2;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	614991	615071	.	+	.	ID=Dca52855.1.exon3;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	615255	615343	.	+	.	ID=Dca52855.1.exon4;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	615470	615561	.	+	.	ID=Dca52855.1.exon5;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	615718	615799	.	+	.	ID=Dca52855.1.exon6;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	616077	616179	.	+	.	ID=Dca52855.1.exon7;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	616265	616318	.	+	.	ID=Dca52855.1.exon8;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	616873	616958	.	+	.	ID=Dca52855.1.exon9;Parent=Dca52855.1
scaffold7	Augus-PASA	exon	617058	617663	.	+	.	ID=Dca52855.1.exon10;Parent=Dca52855.1