Carnation DB

Dca52918.1

Annotation

7-exons
f-1
sp|B9SAF4_RICCO#Vacuolar sorting protein SNF8, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0585710#unknown#0F0P0C
Repeat List (scaffold70)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52918.1	1	249	253	87.35	249	89	6e-131
Target_name	Start	End	Length	Cov(%)
sp\|B9SAF4_RICCO	1	249	250	99.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52918.1	1	250	253	79.44	250	81	9e-124
Target_name	Start	End	Length	Cov(%)
AT4G27040.1	1	250	250	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold70	Augus-PASA	mRNA	316084	318886	.	+	.	ID=Dca52918.1;Parent=Dca52918
scaffold70	Augus-PASA	exon	316084	316134	.	+	.	ID=Dca52918.1.exon1;Parent=Dca52918.1
scaffold70	Augus-PASA	exon	316287	316397	.	+	.	ID=Dca52918.1.exon2;Parent=Dca52918.1
scaffold70	Augus-PASA	exon	316993	317128	.	+	.	ID=Dca52918.1.exon3;Parent=Dca52918.1
scaffold70	Augus-PASA	exon	317524	317678	.	+	.	ID=Dca52918.1.exon4;Parent=Dca52918.1
scaffold70	Augus-PASA	exon	318109	318216	.	+	.	ID=Dca52918.1.exon5;Parent=Dca52918.1
scaffold70	Augus-PASA	exon	318598	318687	.	+	.	ID=Dca52918.1.exon6;Parent=Dca52918.1
scaffold70	Augus-PASA	exon	318776	318886	.	+	.	ID=Dca52918.1.exon7;Parent=Dca52918.1