Dca52958.1
Annotation
- 2-exons
- f-1
- sp|Q94I07_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0034E23.18#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold701)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52958.1 |
663 |
1330 |
1394 |
19.79 |
668 |
36 |
4e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q94I07_ORYSJ |
1602 |
2360 |
2447 |
31.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca52958.1 |
33 |
1333 |
1394 |
30.7 |
1301 |
31 |
1e-161
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
130 |
1410 |
1539 |
83.23 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold701 |
Augustus |
mRNA |
139967 |
144315 |
. |
- |
. |
ID=Dca52958.1;Parent=Dca52958 |
| scaffold701 |
Augustus |
exon |
139967 |
141421 |
. |
- |
. |
ID=Dca52958.1.exon1;Parent=Dca52958.1 |
| scaffold701 |
Augustus |
exon |
141586 |
144315 |
. |
- |
. |
ID=Dca52958.1.exon2;Parent=Dca52958.1 |
