Carnation DB

Dca52996.1

Annotation

12-exons
f-1
sp|B9H650_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1077743#GO:0016021;GO:0008219#0F1P1C
AT2G17430.1 | Symbols: ATMLO7, MLO7, NTA | Seven transmembrane MLO family protein | chr2:7568018-7570758 FORWARD LENGTH=542
Repeat List (scaffold7022)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52996.1	98	242	418	24.64	145	72	1e-58
Target_name	Start	End	Length	Cov(%)
sp\|B9H650_POPTR	254	398	579	25.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca52996.1	98	242	418	22.96	145	67	3e-56
Target_name	Start	End	Length	Cov(%)
AT2G17430.1	249	393	542	26.75

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7022	Augustus	mRNA	14540	20278	.	+	.	ID=Dca52996.1;Parent=Dca52996
scaffold7022	Augustus	exon	14540	14622	.	+	.	ID=Dca52996.1.exon1;Parent=Dca52996.1
scaffold7022	Augustus	exon	15138	15214	.	+	.	ID=Dca52996.1.exon2;Parent=Dca52996.1
scaffold7022	Augustus	exon	15530	15659	.	+	.	ID=Dca52996.1.exon3;Parent=Dca52996.1
scaffold7022	Augustus	exon	16122	16170	.	+	.	ID=Dca52996.1.exon4;Parent=Dca52996.1
scaffold7022	Augustus	exon	16592	16680	.	+	.	ID=Dca52996.1.exon5;Parent=Dca52996.1
scaffold7022	Augustus	exon	16761	16810	.	+	.	ID=Dca52996.1.exon6;Parent=Dca52996.1
scaffold7022	Augustus	exon	16904	16944	.	+	.	ID=Dca52996.1.exon7;Parent=Dca52996.1
scaffold7022	Augustus	exon	17026	17199	.	+	.	ID=Dca52996.1.exon8;Parent=Dca52996.1
scaffold7022	Augustus	exon	17365	17400	.	+	.	ID=Dca52996.1.exon9;Parent=Dca52996.1
scaffold7022	Augustus	exon	19573	19877	.	+	.	ID=Dca52996.1.exon10;Parent=Dca52996.1
scaffold7022	Augustus	exon	19978	20094	.	+	.	ID=Dca52996.1.exon11;Parent=Dca52996.1
scaffold7022	Augustus	exon	20173	20278	.	+	.	ID=Dca52996.1.exon12;Parent=Dca52996.1