Dca5310.1
Annotation
- 4-exons
- f-1
- sp|B9GG85_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_641460#GO:0008270#1F0P0C
- sp|B9SY31_RICCO#Protein binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0067240#GO:0008270#1F0P0C
- Repeat List (scaffold12017)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5310.1 |
53 |
283 |
283 |
48.4 |
231 |
60 |
6e-68
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GG85_POPTR |
36 |
240 |
240 |
85.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5310.1 |
51 |
281 |
283 |
46.99 |
231 |
56 |
2e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0954400-01 |
46 |
259 |
281 |
76.15 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12017 |
Augus-PASA |
mRNA |
3650 |
6360 |
. |
- |
. |
ID=Dca5310.1;Parent=Dca5310 |
| scaffold12017 |
Augus-PASA |
exon |
3650 |
4157 |
. |
- |
. |
ID=Dca5310.1.exon1;Parent=Dca5310.1 |
| scaffold12017 |
Augus-PASA |
exon |
4446 |
4550 |
. |
- |
. |
ID=Dca5310.1.exon2;Parent=Dca5310.1 |
| scaffold12017 |
Augus-PASA |
exon |
5470 |
5633 |
. |
- |
. |
ID=Dca5310.1.exon3;Parent=Dca5310.1 |
| scaffold12017 |
Augus-PASA |
exon |
6286 |
6360 |
. |
- |
. |
ID=Dca5310.1.exon4;Parent=Dca5310.1 |
