Dca53112.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7053)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53112.1 |
110 |
327 |
328 |
42.37 |
218 |
64 |
1e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
163 |
380 |
964 |
22.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53112.1 |
113 |
309 |
328 |
24.69 |
197 |
41 |
8e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
580 |
779 |
1428 |
14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7053 |
Augustus |
mRNA |
10823 |
12521 |
. |
- |
. |
ID=Dca53112.1;Parent=Dca53112 |
| scaffold7053 |
Augustus |
exon |
10823 |
11469 |
. |
- |
. |
ID=Dca53112.1.exon1;Parent=Dca53112.1 |
| scaffold7053 |
Augustus |
exon |
12182 |
12521 |
. |
- |
. |
ID=Dca53112.1.exon2;Parent=Dca53112.1 |
