Dca5328.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold12028)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5328.1 |
1 |
591 |
591 |
59.89 |
591 |
60 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
488 |
1057 |
1313 |
43.41 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5328.1 |
19 |
259 |
591 |
17.08 |
241 |
41 |
2e-49
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
469 |
718 |
1428 |
17.5 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12028 |
Augustus |
mRNA |
8348 |
10229 |
. |
+ |
. |
ID=Dca5328.1;Parent=Dca5328 |
| scaffold12028 |
Augustus |
exon |
8348 |
9123 |
. |
+ |
. |
ID=Dca5328.1.exon1;Parent=Dca5328.1 |
| scaffold12028 |
Augustus |
exon |
9230 |
10229 |
. |
+ |
. |
ID=Dca5328.1.exon2;Parent=Dca5328.1 |
