Dca53713.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7221)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53713.1 |
1 |
377 |
394 |
55.32 |
377 |
58 |
8e-127
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
45 |
426 |
964 |
39.62 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53713.1 |
41 |
318 |
394 |
27.66 |
278 |
39 |
6e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
496 |
779 |
1428 |
19.88 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7221 |
Augustus |
mRNA |
13505 |
16484 |
. |
+ |
. |
ID=Dca53713.1;Parent=Dca53713 |
| scaffold7221 |
Augustus |
exon |
13505 |
14633 |
. |
+ |
. |
ID=Dca53713.1.exon1;Parent=Dca53713.1 |
| scaffold7221 |
Augustus |
exon |
16429 |
16484 |
. |
+ |
. |
ID=Dca53713.1.exon2;Parent=Dca53713.1 |
