Dca53728.1
Annotation
- 3-exons
- f-1
- sp|O23529_ARATH#Retrotransposon like protein#Arabidopsis thaliana (Mouse-ear cress)#Name=dl4465c#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7227)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53728.1 |
1 |
283 |
1014 |
9.66 |
283 |
34 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O23529_ARATH |
97 |
379 |
1474 |
19.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53728.1 |
277 |
994 |
1014 |
24.85 |
718 |
34 |
3e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
671 |
1389 |
1401 |
51.32 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7227 |
Augustus |
mRNA |
7686 |
11648 |
. |
+ |
. |
ID=Dca53728.1;Parent=Dca53728 |
| scaffold7227 |
Augustus |
exon |
7686 |
8520 |
. |
+ |
. |
ID=Dca53728.1.exon1;Parent=Dca53728.1 |
| scaffold7227 |
Augustus |
exon |
9340 |
11266 |
. |
+ |
. |
ID=Dca53728.1.exon2;Parent=Dca53728.1 |
| scaffold7227 |
Augustus |
exon |
11366 |
11648 |
. |
+ |
. |
ID=Dca53728.1.exon3;Parent=Dca53728.1 |
