Dca53731.1
Annotation
- 4-exons
- f-1
- sp|B9SX33_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1267370#GO:0000245#0F1P0C
- AT1G54380.1 | Symbols: | spliceosome protein-related | chr1:20298287-20300899 REVERSE LENGTH=515
- Repeat List (scaffold723)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53731.1 |
270 |
630 |
631 |
27.89 |
361 |
44 |
4e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9SX33_RICCO |
352 |
741 |
757 |
51.51 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca53731.1 |
274 |
628 |
631 |
23.77 |
355 |
42 |
7e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G54380.1 |
177 |
512 |
515 |
65.24 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold723 |
Augustus |
mRNA |
24943 |
29428 |
. |
+ |
. |
ID=Dca53731.1;Parent=Dca53731 |
| scaffold723 |
Augustus |
exon |
24943 |
26029 |
. |
+ |
. |
ID=Dca53731.1.exon1;Parent=Dca53731.1 |
| scaffold723 |
Augustus |
exon |
27381 |
27588 |
. |
+ |
. |
ID=Dca53731.1.exon2;Parent=Dca53731.1 |
| scaffold723 |
Augustus |
exon |
28046 |
28220 |
. |
+ |
. |
ID=Dca53731.1.exon3;Parent=Dca53731.1 |
| scaffold723 |
Augus-PASA |
exon |
29003 |
29428 |
. |
+ |
. |
ID=Dca53731.1.exon4;Parent=Dca53731.1 |
