Carnation DB

Dca53887.1

Annotation

9-exons
f-1
sp|B9GW70_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_757458#GO:0016020;GO:0009055;GO:0008137#2F0P1C
AT4G26965.1 | Symbols: | NADH:ubiquinone oxidoreductase, 17.2kDa subunit | chr4:13539717-13542041 FORWARD LENGTH=184
Repeat List (scaffold728)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53887.1	1	170	170	60.58	170	60	3e-48
Target_name	Start	End	Length	Cov(%)
sp\|B9GW70_POPTR	17	168	168	90.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca53887.1	1	170	170	63.52	170	63	1e-47
Target_name	Start	End	Length	Cov(%)
AT4G26965.1	17	184	184	91.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold728	Augus-PASA	mRNA	51351	58805	.	+	.	ID=Dca53887.1;Parent=Dca53887
scaffold728	Augus-PASA	exon	51351	51414	.	+	.	ID=Dca53887.1.exon1;Parent=Dca53887.1
scaffold728	Augus-PASA	exon	54296	54352	.	+	.	ID=Dca53887.1.exon2;Parent=Dca53887.1
scaffold728	Augus-PASA	exon	54743	54795	.	+	.	ID=Dca53887.1.exon3;Parent=Dca53887.1
scaffold728	Augus-PASA	exon	55301	55352	.	+	.	ID=Dca53887.1.exon4;Parent=Dca53887.1
scaffold728	Augustus	exon	56586	56651	.	+	.	ID=Dca53887.1.exon5;Parent=Dca53887.1
scaffold728	Augustus	exon	56724	56777	.	+	.	ID=Dca53887.1.exon6;Parent=Dca53887.1
scaffold728	Augustus	exon	57925	57967	.	+	.	ID=Dca53887.1.exon7;Parent=Dca53887.1
scaffold728	Augustus	exon	58394	58453	.	+	.	ID=Dca53887.1.exon8;Parent=Dca53887.1
scaffold728	Augustus	exon	58742	58805	.	+	.	ID=Dca53887.1.exon9;Parent=Dca53887.1