Dca54193.1
Annotation
- 3-exons
- f-1
- sp|F4NCG1_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold7358)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54193.1 |
1 |
661 |
667 |
37.33 |
661 |
35 |
9e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCG1_BETVU |
386 |
1099 |
1110 |
64.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54193.1 |
2 |
447 |
667 |
20.98 |
446 |
31 |
4e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
304 |
752 |
857 |
52.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7358 |
Augustus |
mRNA |
800 |
2953 |
. |
+ |
. |
ID=Dca54193.1;Parent=Dca54193 |
| scaffold7358 |
Augustus |
exon |
800 |
2051 |
. |
+ |
. |
ID=Dca54193.1.exon1;Parent=Dca54193.1 |
| scaffold7358 |
Augustus |
exon |
2128 |
2173 |
. |
+ |
. |
ID=Dca54193.1.exon2;Parent=Dca54193.1 |
| scaffold7358 |
Augustus |
exon |
2248 |
2953 |
. |
+ |
. |
ID=Dca54193.1.exon3;Parent=Dca54193.1 |
