Carnation DB

Dca542.1

Annotation

6-exons
f-1
sp|F6GSX4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g07600#unknown#0F0P0C
sp|B9R8Z5_RICCO#Arginine/serine-rich coiled coil protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1512790#unknown#0F0P0C
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca542.1	214	375	378	27.51	162	65	2e-53
Target_name	Start	End	Length	Cov(%)
sp\|F6GSX4_VITVI	194	353	354	45.19

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca542.1	225	376	378	24.07	152	60	4e-46
Target_name	Start	End	Length	Cov(%)
AT3G48120.1	177	328	328	46.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	270338	273613	.	-	.	ID=Dca542.1;Parent=Dca542
scaffold101	Augustus	exon	270338	270394	.	-	.	ID=Dca542.1.exon1;Parent=Dca542.1
scaffold101	Augustus	exon	270485	270649	.	-	.	ID=Dca542.1.exon2;Parent=Dca542.1
scaffold101	Augustus	exon	270780	270844	.	-	.	ID=Dca542.1.exon3;Parent=Dca542.1
scaffold101	Augustus	exon	271184	271273	.	-	.	ID=Dca542.1.exon4;Parent=Dca542.1
scaffold101	Augustus	exon	271793	271844	.	-	.	ID=Dca542.1.exon5;Parent=Dca542.1
scaffold101	Augustus	exon	272906	273613	.	-	.	ID=Dca542.1.exon6;Parent=Dca542.1