Carnation DB

Dca54384.1

Annotation

5-exons
f-1
sp|A9PFS0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1108163#GO:0003824#1F0P0C
sp|B9RM68_RICCO#Protein phosphatase-2c, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1077980#GO:0004721#1F0P0C
Repeat List (scaffold7406)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54384.1	1	482	482	72.82	482	72	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PFS0_POPTR	1	479	493	97.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54384.1	1	482	482	67.01	482	61	6e-165
Target_name	Start	End	Length	Cov(%)
AT3G02750.3	1	526	527	99.81

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7406	Augus-PASA	mRNA	7805	11600	.	-	.	ID=Dca54384.1;Parent=Dca54384
scaffold7406	Augus-PASA	exon	7805	8275	.	-	.	ID=Dca54384.1.exon1;Parent=Dca54384.1
scaffold7406	Augustus	exon	8638	8861	.	-	.	ID=Dca54384.1.exon2;Parent=Dca54384.1
scaffold7406	Augustus	exon	9120	9237	.	-	.	ID=Dca54384.1.exon3;Parent=Dca54384.1
scaffold7406	Augustus	exon	9433	9816	.	-	.	ID=Dca54384.1.exon4;Parent=Dca54384.1
scaffold7406	Augustus	exon	11349	11600	.	-	.	ID=Dca54384.1.exon5;Parent=Dca54384.1