Carnation DB

Dca54477.1

Annotation

6-exons
f-1
sp|Q4W6T6_PETHY#Polypepetide with reverse transcriptase and RNaseH domains#Petunia hybrida (Petunia)#unknown#GO:0003964#1F0P0C
Repeat List (scaffold744)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54477.1	271	558	558	28.85	288	52	8e-84
Target_name	Start	End	Length	Cov(%)
sp\|Q4W6T6_PETHY	65	378	389	80.71

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54477.1	152	261	558	7.52	110	33	1e-11
Target_name	Start	End	Length	Cov(%)
AT4G23160.1	17	145	1262	10.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold744	Augustus	mRNA	32891	35256	.	+	.	ID=Dca54477.1;Parent=Dca54477
scaffold744	Augustus	exon	32891	32977	.	+	.	ID=Dca54477.1.exon1;Parent=Dca54477.1
scaffold744	Augustus	exon	33130	33684	.	+	.	ID=Dca54477.1.exon2;Parent=Dca54477.1
scaffold744	Augustus	exon	33774	33913	.	+	.	ID=Dca54477.1.exon3;Parent=Dca54477.1
scaffold744	Augustus	exon	34189	34202	.	+	.	ID=Dca54477.1.exon4;Parent=Dca54477.1
scaffold744	Augustus	exon	34299	34809	.	+	.	ID=Dca54477.1.exon5;Parent=Dca54477.1
scaffold744	Augustus	exon	34887	35256	.	+	.	ID=Dca54477.1.exon6;Parent=Dca54477.1