Dca54510.1
Annotation
- 3-exons
- f-1
- sp|Q6EIX7_TOBAC#Potyviral capsid protein interacting protein 2b#Nicotiana tabacum (Common tobacco)#Name=CPIP2b#GO:0031072;GO:0051082;GO:0006457#2F1P0C
- Repeat List (scaffold745)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54510.1 |
1 |
330 |
379 |
51.45 |
330 |
60 |
2e-102
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6EIX7_TOBAC |
1 |
302 |
305 |
99.01 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54510.1 |
1 |
327 |
379 |
49.86 |
327 |
56 |
7e-97
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G59725.1 |
1 |
327 |
331 |
98.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold745 |
Augustus |
mRNA |
95980 |
101532 |
. |
- |
. |
ID=Dca54510.1;Parent=Dca54510 |
| scaffold745 |
Augustus |
exon |
95980 |
96141 |
. |
- |
. |
ID=Dca54510.1.exon1;Parent=Dca54510.1 |
| scaffold745 |
Augustus |
exon |
98212 |
98635 |
. |
- |
. |
ID=Dca54510.1.exon2;Parent=Dca54510.1 |
| scaffold745 |
Augus-PASA |
exon |
100979 |
101532 |
. |
- |
. |
ID=Dca54510.1.exon3;Parent=Dca54510.1 |
