Carnation DB

Dca5457.1

Annotation

6-exons
f-1
sp|B9RS10_RICCO#Histidine-containing phosphotransfer protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0801590#GO:0032440;GO:0004871;GO:0000160#2F1P0C
Repeat List (scaffold12090)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5457.1	29	149	194	42.26	121	68	1e-45
Target_name	Start	End	Length	Cov(%)
sp\|B9RS10_RICCO	20	140	169	71.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5457.1	29	157	194	41.75	129	63	2e-44
Target_name	Start	End	Length	Cov(%)
AT3G16360.2	15	143	145	88.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12090	Augustus	mRNA	103	4036	.	-	.	ID=Dca5457.1;Parent=Dca5457
scaffold12090	Augustus	exon	103	236	.	-	.	ID=Dca5457.1.exon1;Parent=Dca5457.1
scaffold12090	Augustus	exon	985	1076	.	-	.	ID=Dca5457.1.exon2;Parent=Dca5457.1
scaffold12090	Augustus	exon	1295	1366	.	-	.	ID=Dca5457.1.exon3;Parent=Dca5457.1
scaffold12090	Augustus	exon	1666	1734	.	-	.	ID=Dca5457.1.exon4;Parent=Dca5457.1
scaffold12090	Augustus	exon	1830	1960	.	-	.	ID=Dca5457.1.exon5;Parent=Dca5457.1
scaffold12090	Augustus	exon	3950	4036	.	-	.	ID=Dca5457.1.exon6;Parent=Dca5457.1