Dca54592.1
Annotation
- 2-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q7XRT2_ORYSJ#OSJNBa0042F21.11 protein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0042F21.11#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7480)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54592.1 |
1 |
316 |
386 |
46.37 |
316 |
57 |
3e-89
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
374 |
653 |
1717 |
16.3 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54592.1 |
165 |
257 |
386 |
8.8 |
93 |
37 |
4e-11
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
98 |
189 |
192 |
47.91 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7480 |
Augustus |
mRNA |
21743 |
25709 |
. |
- |
. |
ID=Dca54592.1;Parent=Dca54592 |
| scaffold7480 |
Augustus |
exon |
21743 |
21958 |
. |
- |
. |
ID=Dca54592.1.exon1;Parent=Dca54592.1 |
| scaffold7480 |
Augustus |
exon |
24765 |
25709 |
. |
- |
. |
ID=Dca54592.1.exon2;Parent=Dca54592.1 |
