Carnation DB

Dca54644.1

Annotation

5-exons
f-1
sp|Q9FIC5_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold7499)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54644.1	268	338	1064	3	71	45	2e-07
Target_name	Start	End	Length	Cov(%)
sp\|Q9FIC5_ARATH	433	502	1462	4.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca54644.1	340	1054	1064	26.22	715	37	3e-123
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	660	1389	1401	52.1

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold7499	Augustus	mRNA	6478	10877	.	-	.	ID=Dca54644.1;Parent=Dca54644
scaffold7499	Augustus	exon	6478	7200	.	-	.	ID=Dca54644.1.exon1;Parent=Dca54644.1
scaffold7499	Augustus	exon	7312	8021	.	-	.	ID=Dca54644.1.exon2;Parent=Dca54644.1
scaffold7499	Augustus	exon	8096	8843	.	-	.	ID=Dca54644.1.exon3;Parent=Dca54644.1
scaffold7499	Augustus	exon	9270	9482	.	-	.	ID=Dca54644.1.exon4;Parent=Dca54644.1
scaffold7499	Augustus	exon	10077	10877	.	-	.	ID=Dca54644.1.exon5;Parent=Dca54644.1