Dca54698.1
Annotation
- 2-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold7500)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54698.1 |
1 |
233 |
373 |
42.62 |
233 |
65 |
6e-92
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
648 |
893 |
896 |
27.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54698.1 |
27 |
222 |
373 |
20.64 |
196 |
37 |
1e-28
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1177 |
1382 |
1401 |
14.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7500 |
Augustus |
mRNA |
5020 |
9942 |
. |
- |
. |
ID=Dca54698.1;Parent=Dca54698 |
| scaffold7500 |
Augustus |
exon |
5020 |
5441 |
. |
- |
. |
ID=Dca54698.1.exon1;Parent=Dca54698.1 |
| scaffold7500 |
Augustus |
exon |
9243 |
9942 |
. |
- |
. |
ID=Dca54698.1.exon2;Parent=Dca54698.1 |
