Carnation DB

Dca548.1

Annotation

8-exons
f-1
sp|D7SIJ8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_17s0000g05310#unknown#0F0P0C
AT5G11010.2 | Symbols: | Pre-mRNA cleavage complex II protein family | chr5:3484176-3486067 FORWARD LENGTH=368
Repeat List (scaffold101)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca548.1	4	330	367	58.31	327	58	1e-111
Target_name	Start	End	Length	Cov(%)
sp\|D7SIJ8_VITVI	1	363	378	96.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca548.1	19	329	367	46.32	311	48	2e-89
Target_name	Start	End	Length	Cov(%)
AT5G11010.2	11	352	368	92.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold101	Augustus	mRNA	323396	327016	.	+	.	ID=Dca548.1;Parent=Dca548
scaffold101	Augustus	exon	323396	323592	.	+	.	ID=Dca548.1.exon1;Parent=Dca548.1
scaffold101	Augus-PASA	exon	324033	324130	.	+	.	ID=Dca548.1.exon2;Parent=Dca548.1
scaffold101	Augus-PASA	exon	324236	324269	.	+	.	ID=Dca548.1.exon3;Parent=Dca548.1
scaffold101	Augus-PASA	exon	324974	325134	.	+	.	ID=Dca548.1.exon4;Parent=Dca548.1
scaffold101	Augus-PASA	exon	325273	325489	.	+	.	ID=Dca548.1.exon5;Parent=Dca548.1
scaffold101	Augustus	exon	325954	326002	.	+	.	ID=Dca548.1.exon6;Parent=Dca548.1
scaffold101	Augustus	exon	326274	326373	.	+	.	ID=Dca548.1.exon7;Parent=Dca548.1
scaffold101	Augustus	exon	326769	327016	.	+	.	ID=Dca548.1.exon8;Parent=Dca548.1