Carnation DB

Dca5498.1

Annotation

7-exons
f-1
sp|F6HFG2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_01s0011g05280#unknown#0F0P0C
Repeat List (scaffold1210)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5498.1	4	201	211	62.55	198	59	1e-66
Target_name	Start	End	Length	Cov(%)
sp\|F6HFG2_VITVI	359	584	594	38.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5498.1	4	194	211	62.08	191	59	5e-62
Target_name	Start	End	Length	Cov(%)
AT1G70770.1	356	579	610	36.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1210	Augustus	mRNA	11826	13656	.	+	.	ID=Dca5498.1;Parent=Dca5498
scaffold1210	Augustus	exon	11826	11841	.	+	.	ID=Dca5498.1.exon1;Parent=Dca5498.1
scaffold1210	Augustus	exon	12394	12515	.	+	.	ID=Dca5498.1.exon2;Parent=Dca5498.1
scaffold1210	Augustus	exon	12596	12725	.	+	.	ID=Dca5498.1.exon3;Parent=Dca5498.1
scaffold1210	Augustus	exon	12850	12929	.	+	.	ID=Dca5498.1.exon4;Parent=Dca5498.1
scaffold1210	Augustus	exon	13025	13057	.	+	.	ID=Dca5498.1.exon5;Parent=Dca5498.1
scaffold1210	Augustus	exon	13137	13160	.	+	.	ID=Dca5498.1.exon6;Parent=Dca5498.1
scaffold1210	Augustus	exon	13426	13656	.	+	.	ID=Dca5498.1.exon7;Parent=Dca5498.1