Dca54982.1
Annotation
- 3-exons
- f-1
- sp|A9PIK2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_547984#unknown#0F0P0C
- sp|B9RWM7_RICCO#Pectate lyase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1022270#GO:0030570#1F0P0C
- Repeat List (scaffold76)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54982.1 |
22 |
179 |
179 |
69.83 |
158 |
80 |
2e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PIK2_POPTR |
54 |
211 |
450 |
35.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca54982.1 |
8 |
179 |
179 |
69.83 |
172 |
73 |
2e-71
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G07010.1 |
6 |
177 |
416 |
41.34 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold76 |
Augus-PASA |
mRNA |
10691 |
16089 |
. |
+ |
. |
ID=Dca54982.1;Parent=Dca54982 |
| scaffold76 |
Augus-PASA |
exon |
10691 |
10761 |
. |
+ |
. |
ID=Dca54982.1.exon1;Parent=Dca54982.1 |
| scaffold76 |
Augus-PASA |
exon |
13903 |
13980 |
. |
+ |
. |
ID=Dca54982.1.exon2;Parent=Dca54982.1 |
| scaffold76 |
Augus-PASA |
exon |
15699 |
16089 |
. |
+ |
. |
ID=Dca54982.1.exon3;Parent=Dca54982.1 |
