Carnation DB

Dca55002.1

Annotation

6-exons
f-1
sp|Q42872_SOLLC#Endo-1,4-beta-glucanase#Solanum lycopersicum (Tomato) (Lycopersicon esculentum)#Name=Cel2#GO:0008810;GO:0005975#1F1P0C
Repeat List (scaffold76)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55002.1	6	435	436	71.78	430	64	6e-173
Target_name	Start	End	Length	Cov(%)
sp\|Q42872_SOLLC	3	487	489	99.18

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca55002.1	16	435	436	63.76	420	58	5e-147
Target_name	Start	End	Length	Cov(%)
Os06t0256900-01	8	486	498	96.18

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold76	Augustus	mRNA	146862	151972	.	-	.	ID=Dca55002.1;Parent=Dca55002
scaffold76	Augustus	exon	146862	147169	.	-	.	ID=Dca55002.1.exon1;Parent=Dca55002.1
scaffold76	Augustus	exon	148321	148432	.	-	.	ID=Dca55002.1.exon2;Parent=Dca55002.1
scaffold76	Augustus	exon	149725	149886	.	-	.	ID=Dca55002.1.exon3;Parent=Dca55002.1
scaffold76	Augustus	exon	150399	150497	.	-	.	ID=Dca55002.1.exon4;Parent=Dca55002.1
scaffold76	Augustus	exon	150858	151268	.	-	.	ID=Dca55002.1.exon5;Parent=Dca55002.1
scaffold76	Augustus	exon	151754	151972	.	-	.	ID=Dca55002.1.exon6;Parent=Dca55002.1