Dca5501.1
Annotation
- 3-exons
- f-1
- sp|B9I3W4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_422093#GO:0016021;GO:0005886;GO:0008643#0F1P2C
- Repeat List (scaffold1210)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5501.1 |
2 |
109 |
109 |
40.36 |
108 |
41 |
1e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I3W4_POPTR |
103 |
210 |
211 |
51.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5501.1 |
21 |
109 |
109 |
33.94 |
89 |
42 |
2e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G13170.1 |
132 |
220 |
292 |
30.47 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1210 |
Augustus |
mRNA |
52438 |
52980 |
. |
+ |
. |
ID=Dca5501.1;Parent=Dca5501 |
| scaffold1210 |
Augustus |
exon |
52438 |
52569 |
. |
+ |
. |
ID=Dca5501.1.exon1;Parent=Dca5501.1 |
| scaffold1210 |
Augustus |
exon |
52665 |
52784 |
. |
+ |
. |
ID=Dca5501.1.exon2;Parent=Dca5501.1 |
| scaffold1210 |
Augustus |
exon |
52903 |
52980 |
. |
+ |
. |
ID=Dca5501.1.exon3;Parent=Dca5501.1 |
