Dca55215.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold7653)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55215.1 |
2 |
69 |
99 |
35.35 |
68 |
52 |
2e-15
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
634 |
701 |
964 |
7.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55215.1 |
1 |
66 |
99 |
27.27 |
66 |
41 |
3e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| ATMG00810.1 |
1 |
64 |
240 |
26.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7653 |
Augustus |
mRNA |
3778 |
4254 |
. |
+ |
. |
ID=Dca55215.1;Parent=Dca55215 |
| scaffold7653 |
Augustus |
exon |
3778 |
3975 |
. |
+ |
. |
ID=Dca55215.1.exon1;Parent=Dca55215.1 |
| scaffold7653 |
Augustus |
exon |
4153 |
4254 |
. |
+ |
. |
ID=Dca55215.1.exon2;Parent=Dca55215.1 |
