Dca55345.1
Annotation
- 4-exons
- f-1
- sp|D7T0X4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0085g00200#unknown#0F0P0C
- sp|B9RI06_RICCO#Pentatricopeptide repeat-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1574810#GO:0005488#1F0P0C
- Repeat List (scaffold77)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55345.1 |
1 |
146 |
147 |
59.18 |
146 |
58 |
4e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7T0X4_VITVI |
1 |
146 |
147 |
99.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55345.1 |
76 |
146 |
147 |
34.01 |
71 |
71 |
8e-25
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os02t0170200-01 |
91 |
161 |
163 |
43.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold77 |
Augus-PASA |
mRNA |
163160 |
164897 |
. |
- |
. |
ID=Dca55345.1;Parent=Dca55345 |
| scaffold77 |
Augus-PASA |
exon |
163160 |
163393 |
. |
- |
. |
ID=Dca55345.1.exon1;Parent=Dca55345.1 |
| scaffold77 |
Augus-PASA |
exon |
163520 |
163563 |
. |
- |
. |
ID=Dca55345.1.exon2;Parent=Dca55345.1 |
| scaffold77 |
Augus-PASA |
exon |
164625 |
164726 |
. |
- |
. |
ID=Dca55345.1.exon3;Parent=Dca55345.1 |
| scaffold77 |
Augus-PASA |
exon |
164834 |
164897 |
. |
- |
. |
ID=Dca55345.1.exon4;Parent=Dca55345.1 |
