Dca55509.1
Annotation
- 4-exons
- f-1
- sp|B9MYJ4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_679806#GO:0003735;GO:0006412#1F1P0C
- Os07t0292800-01 Ribosomal protein L24e domain containing protein.
- Repeat List (scaffold774)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55509.1 |
1 |
168 |
168 |
72.02 |
168 |
72 |
9e-65
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9MYJ4_POPTR |
1 |
168 |
168 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca55509.1 |
1 |
168 |
168 |
65.47 |
168 |
66 |
1e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0292800-01 |
1 |
163 |
164 |
99.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold774 |
Augustus |
mRNA |
31000 |
32876 |
. |
+ |
. |
ID=Dca55509.1;Parent=Dca55509 |
| scaffold774 |
Augustus |
exon |
31000 |
31080 |
. |
+ |
. |
ID=Dca55509.1.exon1;Parent=Dca55509.1 |
| scaffold774 |
Augustus |
exon |
32122 |
32235 |
. |
+ |
. |
ID=Dca55509.1.exon2;Parent=Dca55509.1 |
| scaffold774 |
Augustus |
exon |
32349 |
32485 |
. |
+ |
. |
ID=Dca55509.1.exon3;Parent=Dca55509.1 |
| scaffold774 |
Augustus |
exon |
32702 |
32876 |
. |
+ |
. |
ID=Dca55509.1.exon4;Parent=Dca55509.1 |
