Dca5553.1
Annotation
- 4-exons
- f-1
- sp|B9GQC7_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_552204#unknown#0F0P0C
- Repeat List (scaffold12122)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5553.1 |
2 |
142 |
172 |
47.67 |
141 |
57 |
1e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GQC7_POPTR |
180 |
322 |
1077 |
13.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5553.1 |
2 |
136 |
172 |
41.86 |
135 |
53 |
2e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G01290.1 |
182 |
316 |
991 |
13.62 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold12122 |
Augustus |
mRNA |
5381 |
6528 |
. |
+ |
. |
ID=Dca5553.1;Parent=Dca5553 |
| scaffold12122 |
Augustus |
exon |
5381 |
5419 |
. |
+ |
. |
ID=Dca5553.1.exon1;Parent=Dca5553.1 |
| scaffold12122 |
Augustus |
exon |
5553 |
5661 |
. |
+ |
. |
ID=Dca5553.1.exon2;Parent=Dca5553.1 |
| scaffold12122 |
Augustus |
exon |
5927 |
6228 |
. |
+ |
. |
ID=Dca5553.1.exon3;Parent=Dca5553.1 |
| scaffold12122 |
Augustus |
exon |
6460 |
6528 |
. |
+ |
. |
ID=Dca5553.1.exon4;Parent=Dca5553.1 |
