Dca56020.1
Annotation
- 4-exons
- f-1
- sp|Q8W3T9_SILOT#Reverse transcriptase#Silene otites (Spanish catchfly)#Name=OTR1#GO:0003964#1F0P0C
- Repeat List (scaffold7887)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56020.1 |
21 |
107 |
253 |
32.8 |
87 |
96 |
6e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8W3T9_SILOT |
1 |
87 |
92 |
94.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca56020.1 |
2 |
105 |
253 |
18.18 |
104 |
45 |
5e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
1002 |
1105 |
1428 |
7.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold7887 |
Augustus |
mRNA |
20477 |
22590 |
. |
+ |
. |
ID=Dca56020.1;Parent=Dca56020 |
| scaffold7887 |
Augustus |
exon |
20477 |
20796 |
. |
+ |
. |
ID=Dca56020.1.exon1;Parent=Dca56020.1 |
| scaffold7887 |
Augustus |
exon |
21092 |
21298 |
. |
+ |
. |
ID=Dca56020.1.exon2;Parent=Dca56020.1 |
| scaffold7887 |
Augustus |
exon |
21483 |
21531 |
. |
+ |
. |
ID=Dca56020.1.exon3;Parent=Dca56020.1 |
| scaffold7887 |
Augustus |
exon |
22405 |
22590 |
. |
+ |
. |
ID=Dca56020.1.exon4;Parent=Dca56020.1 |
