Carnation DB

Dca56779.1

Annotation

13-exons
f-1
sp|B9N1T1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1114983#GO:0005525;GO:0003924#2F0P0C
sp|Q40582_TOBAC#SUP2 protein#Nicotiana tabacum (Common tobacco)#Name=SUP2#GO:0005525;GO:0003924;GO:0003747#3F0P0C
Repeat List (scaffold8063)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56779.1	208	460	462	32.25	253	59	2e-75
Target_name	Start	End	Length	Cov(%)
sp\|B9N1T1_POPTR	325	520	524	37.4

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca56779.1	167	448	462	31.16	282	47	1e-63
Target_name	Start	End	Length	Cov(%)
Os04t0270100-03	189	441	445	56.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold8063	Augustus	mRNA	11597	18788	.	-	.	ID=Dca56779.1;Parent=Dca56779
scaffold8063	Augustus	exon	11597	11646	.	-	.	ID=Dca56779.1.exon1;Parent=Dca56779.1
scaffold8063	Augustus	exon	11731	11809	.	-	.	ID=Dca56779.1.exon2;Parent=Dca56779.1
scaffold8063	Augustus	exon	12265	12429	.	-	.	ID=Dca56779.1.exon3;Parent=Dca56779.1
scaffold8063	Augustus	exon	14200	14364	.	-	.	ID=Dca56779.1.exon4;Parent=Dca56779.1
scaffold8063	Augustus	exon	14843	14907	.	-	.	ID=Dca56779.1.exon5;Parent=Dca56779.1
scaffold8063	Augustus	exon	15096	15231	.	-	.	ID=Dca56779.1.exon6;Parent=Dca56779.1
scaffold8063	Augustus	exon	15321	15491	.	-	.	ID=Dca56779.1.exon7;Parent=Dca56779.1
scaffold8063	Augustus	exon	15604	15668	.	-	.	ID=Dca56779.1.exon8;Parent=Dca56779.1
scaffold8063	Augustus	exon	15857	15992	.	-	.	ID=Dca56779.1.exon9;Parent=Dca56779.1
scaffold8063	Augustus	exon	16082	16187	.	-	.	ID=Dca56779.1.exon10;Parent=Dca56779.1
scaffold8063	Augustus	exon	17631	17781	.	-	.	ID=Dca56779.1.exon11;Parent=Dca56779.1
scaffold8063	Augustus	exon	17946	18010	.	-	.	ID=Dca56779.1.exon12;Parent=Dca56779.1
scaffold8063	Augustus	exon	18754	18788	.	-	.	ID=Dca56779.1.exon13;Parent=Dca56779.1