Dca57938.1
Annotation
- 3-exons
- f-1
- sp|A5BQ39_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_024133#GO:0003676;GO:0008270#2F0P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold842)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57938.1 |
272 |
737 |
756 |
26.45 |
466 |
42 |
6e-83
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BQ39_VITVI |
16 |
431 |
555 |
74.95 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca57938.1 |
372 |
737 |
756 |
17.85 |
366 |
36 |
5e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
720 |
1061 |
1401 |
24.41 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold842 |
Augustus |
mRNA |
8652 |
11979 |
. |
- |
. |
ID=Dca57938.1;Parent=Dca57938 |
| scaffold842 |
Augustus |
exon |
8652 |
8711 |
. |
- |
. |
ID=Dca57938.1.exon1;Parent=Dca57938.1 |
| scaffold842 |
Augustus |
exon |
8797 |
9881 |
. |
- |
. |
ID=Dca57938.1.exon2;Parent=Dca57938.1 |
| scaffold842 |
Augustus |
exon |
10854 |
11979 |
. |
- |
. |
ID=Dca57938.1.exon3;Parent=Dca57938.1 |
