Carnation DB

Dca5794.1

Annotation

7-exons
f-1
sp|B9N3H8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_811009#GO:0016021#0F0P1C
AT2G33820.1 | Symbols: ATMBAC1, MBAC1 | Mitochondrial substrate carrier family protein | chr2:14306293-14308293 REVERSE LENGTH=311
Repeat List (scaffold12232)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5794.1	9	258	260	71.92	250	64	2e-101
Target_name	Start	End	Length	Cov(%)
sp\|B9N3H8_POPTR	7	301	302	97.68

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca5794.1	9	260	260	64.23	252	57	1e-94
Target_name	Start	End	Length	Cov(%)
AT2G33820.1	15	311	311	95.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold12232	Augustus	mRNA	2488	4944	.	+	.	ID=Dca5794.1;Parent=Dca5794
scaffold12232	Augustus	exon	2488	2586	.	+	.	ID=Dca5794.1.exon1;Parent=Dca5794.1
scaffold12232	Augustus	exon	3120	3209	.	+	.	ID=Dca5794.1.exon2;Parent=Dca5794.1
scaffold12232	Augustus	exon	3808	3912	.	+	.	ID=Dca5794.1.exon3;Parent=Dca5794.1
scaffold12232	Augustus	exon	3986	4043	.	+	.	ID=Dca5794.1.exon4;Parent=Dca5794.1
scaffold12232	Augustus	exon	4154	4350	.	+	.	ID=Dca5794.1.exon5;Parent=Dca5794.1
scaffold12232	Augustus	exon	4612	4710	.	+	.	ID=Dca5794.1.exon6;Parent=Dca5794.1
scaffold12232	Augustus	exon	4810	4944	.	+	.	ID=Dca5794.1.exon7;Parent=Dca5794.1