Dca580.1
Annotation
- 4-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1011)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca580.1 |
143 |
627 |
657 |
35 |
485 |
48 |
2e-120
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
425 |
909 |
1365 |
35.53 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca580.1 |
176 |
645 |
657 |
25.26 |
470 |
35 |
5e-78
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
365 |
834 |
857 |
54.84 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1011 |
Augustus |
mRNA |
48981 |
54572 |
. |
- |
. |
ID=Dca580.1;Parent=Dca580 |
| scaffold1011 |
Augustus |
exon |
48981 |
50504 |
. |
- |
. |
ID=Dca580.1.exon1;Parent=Dca580.1 |
| scaffold1011 |
Augustus |
exon |
53927 |
54019 |
. |
- |
. |
ID=Dca580.1.exon2;Parent=Dca580.1 |
| scaffold1011 |
Augustus |
exon |
54113 |
54361 |
. |
- |
. |
ID=Dca580.1.exon3;Parent=Dca580.1 |
| scaffold1011 |
Augustus |
exon |
54465 |
54572 |
. |
- |
. |
ID=Dca580.1.exon4;Parent=Dca580.1 |
