Carnation DB

Dca581.1

Annotation

10-exons
f-1
sp|D7TUC2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0017g01640#GO:0005737;GO:0005524;GO:0004817;GO:0006423#2F1P1C
AT2G31170.1 | Symbols: SYCO ARATH | Cysteinyl-tRNA synthetase, class Ia family protein | chr2:13282559-13285616 REVERSE LENGTH=563
Repeat List (scaffold1011)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca581.1	37	570	571	54.29	534	58	4e-171
Target_name	Start	End	Length	Cov(%)
sp\|D7TUC2_VITVI	12	504	513	96.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca581.1	37	567	571	50.26	531	55	1e-160
Target_name	Start	End	Length	Cov(%)
AT2G31170.1	70	552	563	85.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1011	Augustus	mRNA	69960	77476	.	-	.	ID=Dca581.1;Parent=Dca581
scaffold1011	Augustus	exon	69960	70175	.	-	.	ID=Dca581.1.exon1;Parent=Dca581.1
scaffold1011	Augustus	exon	70444	70557	.	-	.	ID=Dca581.1.exon2;Parent=Dca581.1
scaffold1011	Augus-PASA	exon	70810	71028	.	-	.	ID=Dca581.1.exon3;Parent=Dca581.1
scaffold1011	Augustus	exon	71231	71326	.	-	.	ID=Dca581.1.exon4;Parent=Dca581.1
scaffold1011	Augus-PASA	exon	72324	72449	.	-	.	ID=Dca581.1.exon5;Parent=Dca581.1
scaffold1011	Augus-PASA	exon	72543	72827	.	-	.	ID=Dca581.1.exon6;Parent=Dca581.1
scaffold1011	Augus-PASA	exon	72916	73089	.	-	.	ID=Dca581.1.exon7;Parent=Dca581.1
scaffold1011	Augus-PASA	exon	73978	74154	.	-	.	ID=Dca581.1.exon8;Parent=Dca581.1
scaffold1011	Augus-PASA	exon	75919	75982	.	-	.	ID=Dca581.1.exon9;Parent=Dca581.1
scaffold1011	Augus-PASA	exon	77232	77476	.	-	.	ID=Dca581.1.exon10;Parent=Dca581.1