Dca5813.1
Annotation
- 3-exons
- f-1
- sp|Q4W6T6_PETHY#Polypepetide with reverse transcriptase and RNaseH domains#Petunia hybrida (Petunia)#unknown#GO:0003964#1F0P0C
- Repeat List (scaffold1224)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5813.1 |
56 |
193 |
194 |
35.05 |
138 |
50 |
1e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q4W6T6_PETHY |
68 |
205 |
389 |
35.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca5813.1 |
56 |
194 |
194 |
26.8 |
139 |
38 |
1e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
282 |
420 |
1262 |
11.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1224 |
Augustus |
mRNA |
96333 |
99000 |
. |
+ |
. |
ID=Dca5813.1;Parent=Dca5813 |
| scaffold1224 |
Augustus |
exon |
96333 |
96397 |
. |
+ |
. |
ID=Dca5813.1.exon1;Parent=Dca5813.1 |
| scaffold1224 |
Augustus |
exon |
96494 |
96603 |
. |
+ |
. |
ID=Dca5813.1.exon2;Parent=Dca5813.1 |
| scaffold1224 |
Augustus |
exon |
98591 |
99000 |
. |
+ |
. |
ID=Dca5813.1.exon3;Parent=Dca5813.1 |
