Dca58526.1
Annotation
- 3-exons
- f-1
- sp|B9N6P0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_583858#GO:0008270#1F0P0C
- AT5G15790.1 | Symbols: | RING/U-box superfamily protein | chr5:5149800-5150964 FORWARD LENGTH=232
- Repeat List (scaffold86)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58526.1 |
1 |
183 |
184 |
71.73 |
183 |
72 |
4e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9N6P0_POPTR |
41 |
224 |
225 |
81.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58526.1 |
1 |
184 |
184 |
59.23 |
184 |
57 |
9e-56
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G15790.1 |
41 |
232 |
232 |
82.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold86 |
Augus-PASA |
mRNA |
239347 |
240616 |
. |
- |
. |
ID=Dca58526.1;Parent=Dca58526 |
| scaffold86 |
Augus-PASA |
exon |
239347 |
239373 |
. |
- |
. |
ID=Dca58526.1.exon1;Parent=Dca58526.1 |
| scaffold86 |
Augus-PASA |
exon |
239936 |
240045 |
. |
- |
. |
ID=Dca58526.1.exon2;Parent=Dca58526.1 |
| scaffold86 |
Augustus |
exon |
240199 |
240616 |
. |
- |
. |
ID=Dca58526.1.exon3;Parent=Dca58526.1 |
