Carnation DB

Dca58543.1

Annotation

6-exons
f-1
sp|A5AG79_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_009092#unknown#0F0P0C
AT5G13800.2 | Symbols: PPH, CRN1 | pheophytinase | chr5:4452063-4454141 REVERSE LENGTH=484
Repeat List (scaffold86)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58543.1	1	489	495	58.18	489	52	4e-154
Target_name	Start	End	Length	Cov(%)
sp\|A5AG79_VITVI	1	551	556	99.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58543.1	94	473	495	48.68	380	59	2e-139
Target_name	Start	End	Length	Cov(%)
AT5G13800.2	52	462	484	84.91

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold86	Augustus	mRNA	405710	408138	.	+	.	ID=Dca58543.1;Parent=Dca58543
scaffold86	Augustus	exon	405710	406462	.	+	.	ID=Dca58543.1.exon1;Parent=Dca58543.1
scaffold86	Augus-PASA	exon	406886	407112	.	+	.	ID=Dca58543.1.exon2;Parent=Dca58543.1
scaffold86	Augus-PASA	exon	407210	407401	.	+	.	ID=Dca58543.1.exon3;Parent=Dca58543.1
scaffold86	Augustus	exon	407523	407555	.	+	.	ID=Dca58543.1.exon4;Parent=Dca58543.1
scaffold86	Augustus	exon	407643	407679	.	+	.	ID=Dca58543.1.exon5;Parent=Dca58543.1
scaffold86	Augus-PASA	exon	407893	408138	.	+	.	ID=Dca58543.1.exon6;Parent=Dca58543.1