Carnation DB

Dca58546.1

Annotation

8-exons
f-1
sp|D7TDM2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0158g00120#GO:0008168#1F0P0C
AT3G60910.1 | Symbols: | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | chr3:22501727-22503182 FORWARD LENGTH=252
Repeat List (scaffold86)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58546.1	1	243	247	74.49	243	75	6e-104
Target_name	Start	End	Length	Cov(%)
sp\|D7TDM2_VITVI	1	245	253	96.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58546.1	1	236	247	68.01	236	71	4e-97
Target_name	Start	End	Length	Cov(%)
AT3G60910.1	1	236	252	93.65

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold86	Augus-PASA	mRNA	427049	429959	.	+	.	ID=Dca58546.1;Parent=Dca58546
scaffold86	Augus-PASA	exon	427049	427238	.	+	.	ID=Dca58546.1.exon1;Parent=Dca58546.1
scaffold86	Augus-PASA	exon	427330	427443	.	+	.	ID=Dca58546.1.exon2;Parent=Dca58546.1
scaffold86	Augus-PASA	exon	427526	427594	.	+	.	ID=Dca58546.1.exon3;Parent=Dca58546.1
scaffold86	Augus-PASA	exon	427718	427737	.	+	.	ID=Dca58546.1.exon4;Parent=Dca58546.1
scaffold86	Augus-PASA	exon	427836	427888	.	+	.	ID=Dca58546.1.exon5;Parent=Dca58546.1
scaffold86	Augus-PASA	exon	427991	428021	.	+	.	ID=Dca58546.1.exon6;Parent=Dca58546.1
scaffold86	Augus-PASA	exon	428133	428214	.	+	.	ID=Dca58546.1.exon7;Parent=Dca58546.1
scaffold86	Augus-PASA	exon	429775	429959	.	+	.	ID=Dca58546.1.exon8;Parent=Dca58546.1