Carnation DB

Dca58594.1

Annotation

5-exons
f-1
sp|D7T3K4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0088g01000#unknown#0F0P0C
Repeat List (scaffold861)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58594.1	226	459	477	27.04	234	54	1e-52
Target_name	Start	End	Length	Cov(%)
sp\|D7T3K4_VITVI	167	398	420	55.23

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca58594.1	223	434	477	21.8	212	48	1e-41
Target_name	Start	End	Length	Cov(%)
Os07t0213400-01	8	207	267	74.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold861	Augus-PASA	mRNA	29320	34287	.	-	.	ID=Dca58594.1;Parent=Dca58594
scaffold861	Augus-PASA	exon	29320	29638	.	-	.	ID=Dca58594.1.exon1;Parent=Dca58594.1
scaffold861	Augus-PASA	exon	30420	30690	.	-	.	ID=Dca58594.1.exon2;Parent=Dca58594.1
scaffold861	Augus-PASA	exon	31377	31550	.	-	.	ID=Dca58594.1.exon3;Parent=Dca58594.1
scaffold861	Augustus	exon	32278	32400	.	-	.	ID=Dca58594.1.exon4;Parent=Dca58594.1
scaffold861	Augustus	exon	33741	34287	.	-	.	ID=Dca58594.1.exon5;Parent=Dca58594.1