Dca58653.1
Annotation
- 2-exons
- f-1
- sp|Q9ZQM0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g11240#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold863)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58653.1 |
1 |
238 |
518 |
20.46 |
238 |
45 |
6e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQM0_ARATH |
399 |
636 |
1044 |
22.79 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58653.1 |
1 |
245 |
518 |
16.6 |
245 |
35 |
3e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
492 |
734 |
857 |
28.35 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold863 |
Augustus |
mRNA |
11623 |
13438 |
. |
+ |
. |
ID=Dca58653.1;Parent=Dca58653 |
| scaffold863 |
Augustus |
exon |
11623 |
12339 |
. |
+ |
. |
ID=Dca58653.1.exon1;Parent=Dca58653.1 |
| scaffold863 |
Augustus |
exon |
12599 |
13438 |
. |
+ |
. |
ID=Dca58653.1.exon2;Parent=Dca58653.1 |
