Dca58682.1
Annotation
- 4-exons
- f-1
- sp|O24366_SPIOL#Putative uncharacterized protein sam2B#Spinacia oleracea (Spinach)#Name=sam2B#GO:0005488#1F0P0C
- AT3G26580.1 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:9758933-9760349 FORWARD LENGTH=350
- Repeat List (scaffold864)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58682.1 |
1 |
358 |
358 |
68.15 |
358 |
67 |
3e-130
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O24366_SPIOL |
1 |
339 |
339 |
100 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca58682.1 |
1 |
358 |
358 |
55.58 |
358 |
53 |
9e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G26580.1 |
1 |
350 |
350 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold864 |
Augustus |
mRNA |
30349 |
33484 |
. |
+ |
. |
ID=Dca58682.1;Parent=Dca58682 |
| scaffold864 |
Augustus |
exon |
30349 |
30858 |
. |
+ |
. |
ID=Dca58682.1.exon1;Parent=Dca58682.1 |
| scaffold864 |
Augus-PASA |
exon |
32250 |
32402 |
. |
+ |
. |
ID=Dca58682.1.exon2;Parent=Dca58682.1 |
| scaffold864 |
Augus-PASA |
exon |
32507 |
32712 |
. |
+ |
. |
ID=Dca58682.1.exon3;Parent=Dca58682.1 |
| scaffold864 |
Augus-PASA |
exon |
33277 |
33484 |
. |
+ |
. |
ID=Dca58682.1.exon4;Parent=Dca58682.1 |
